S3 plotting method for diffnet objects.

S3 plotting method for diffnet objects.

# S3 method for class 'diffnet'
plot(
  x,
  y = NULL,
  t = 1,
  vertex.color = c(adopt = "steelblue", noadopt = "white"),
  vertex.size = "degree",
  main = "Diffusion network in time %d",
  minmax.relative.size = getOption("diffnet.minmax.relative.size", c(0.01, 0.04)),
  ...
)

Arguments

x

An object of class diffnet

y

Ignored.

t

Integer scalar indicating the time slice to plot.

vertex.color

Character scalar/vector. Color of the vertices.

vertex.size

Either a numeric scalar or vector of size \(n\), or any of the following values: "indegree", "degree", or "outdegree" (see details).

main

Character. A title template to be passed to sprintf.

minmax.relative.size

Passed to rescale_vertex_igraph.

...

Further arguments passed to plot.igraph.

Value

A matrix with the coordinates of the vertices.

Details

Plotting is done via the function plot.igraph.

When vertex.size is either of "degree", "indegree", or "outdegree", vertex.size will be replace with dgr(.,cmode = ) so that the vertex size reflects the desired degree.

The argument minmax.relative.size is passed to rescale_vertex_igraph which adjusts vertex.size so that the largest and smallest vertices have a relative size of minmax.relative.size[2] and minmax.relative.size[1] respectively with respect to the x-axis.

See also

Other diffnet methods: %*%(), as.array.diffnet(), c.diffnet(), diffnet-arithmetic, diffnet-class, diffnet_index, summary.diffnet()

Author

George G. Vega Yon

Examples

data(medInnovationsDiffNet)
plot(medInnovationsDiffNet)